Ours after treatment. Treated AC was also assessed by the expressions

Ours after treatment. Treated AC was also assessed by the expressions of several marker genes.TUNEL stainingIn situ TUNEL assay for detecting apoptotic cells were carried out by previous method [17]. Briefly, fixed and bleached Dimethylenastron custom synthesis embryos were incubated with TdT enzyme (Invitrogen) and DIG-dUTP (Roche) for 1day. After washing, embryos were incubated with anti-DIG antibody, washed with MAB and detected with BMpurple (Roche).RT-PCRWe synthesized cDNA with 0.3 mg of total RNA prepared from 5?0 ACs. For reverse transcription, we used Superscript III (Invitrogen), and PCR was carried out with Ex Taq DNA polymerase (Takara, Japan). Primer sets used for PCR were as follows: ODC: GCCATTGTGAAGACTCTCTCCATTC and TTCGGGTGATTCCTTGCCAC; Xbra: AGCCTGTCTGTCAATGCTCC and ACTGAGACACTGGTGTGATGG; Chd: AACTGCCAGGACTGGATGGT and GGCAGGATTTAGAGTTGCTTC; Gsc: CACACAAAGTCGCAGAGTCTC and GGAGAGCAGAAGTTGGGGCCA; Siamois: TACCGCACTGACTCTGCAAG and CTGAGGCTCCTGTGGAATTC; Xnr1: GCAGTTAATGATTTTACTGGC and CAACAAAGCCAAGGCATAAC; Xnr2: ATCTGATGCCGTTCTAAGCC and GACCTTCTTCAACCTCAGCC; Xnr3: CTTCTGCACTAGATTCTG and CAGCTTCTGGCCAAGACT; Xnr5: TCACAATCCTTTCACTAGGGC and GGAACCTCTGAAAGGAAGGC; Xnr6: TCCAGTATGATCCATCTGTTGC and TTCTCGTTCCTCTTGTGCCTT. Xvent1: AAGTATGCCAAGGAGATGCC and AGCTTCTTCCGTTCAGATGC; Xvent2: TGAGACTTGGGCACTGTCTG and CCTCTGTTGAATGGCTTGCT; Xwnt8: AGATGACGGCATTCCAGA and TCTCCCGATATCTCAGGA; mix: GTGTCACTGACACCAGAA and AATGTCTCAAGGCAGAGG; mixer: CAATGTCACATCAACTGAAG and CACCAGCCCAGCACTTAACC;Cycloheximide (CHX) treatmentThe procedure for CHX treatment was basically carried out as previously described [18]. Normal or Injected embryos were treated with 40 ng/ml of CHX in 16Steinberg’s solution at Stage 7, and was homogenized at Stage 9.Xenopus Nanog gene cloningTo clone the Xenopus homolog of Nanog gene, we carried out degenerated PCR with following primers: U1: CC(T/C)GA(T/C)TC(A/T)GCCACCAG(T/C)CC(A/ C)AA(G/A), U2: TC(A/T)CC(T/C)GA(T/C)TC(A/T)GCCACCAG(T/ C)CC(A/C), L1: CTGGAACCAG(G/T)TCTT(A/C)ACCTG, L2: CAT(T/C)CT(A/T)CG(G/A)TTCTGGAACCA, L3: TTCAT(T/C)CT(A/T)CG(G/A)TTCTGGAACCAG, and L4: G(G/T)TCTT(A/C)ACCTG(T/C)TTGTA(G/ T)GTGAG. The positions of these primers are summarized in Fig. S1.Results mNanog injection stimulated mesoderm-inducing activity in ACAt first, we confirmed the expression of mNanog protein in Xenopus embryo. By Western blot analysis, we could detect aDorsal Mesoderm-Inducing Activity of Nanogprotein of 40 kDa, consistent with the molecular size of the mNanog protein (Fig. 1A). Immunohistochemistry with antimNanog antibody showed intense mNanog reactivity in the nuclei of mNanog-injected embryos (Fig. 1B, C). Next, we examined the effects of mNanog on Xenopus early embryogenesis. 200 pg of mNanog mRNA injected into the animal pole of 4-cell embryos caused a defect in the anterior region at the late neural stage (Fig. 1D, E), although no obvious developmental delay was observed (data not shown). In 3-day-old tadpoles, head defects with small 12926553 eye vesicles could be seen (Fig. 1G, Table S1). This head defect was more intense and lethality was also purchase 223488-57-1 strikingly increased by injection with 400 pg of mNanog (Table S1), although the lethality did not manifest until the neural stage (data not shown). To examine whether the head defect occurred by apoptosis, we carried out terminal deoxynucleotidyl transferasemediated deoxyuridine-triphosphate nick end-labeling (TUNEL) assays. mNanog injection increased the number of apoptosis-positive cells, suggesting that the head defect w.Ours after treatment. Treated AC was also assessed by the expressions of several marker genes.TUNEL stainingIn situ TUNEL assay for detecting apoptotic cells were carried out by previous method [17]. Briefly, fixed and bleached embryos were incubated with TdT enzyme (Invitrogen) and DIG-dUTP (Roche) for 1day. After washing, embryos were incubated with anti-DIG antibody, washed with MAB and detected with BMpurple (Roche).RT-PCRWe synthesized cDNA with 0.3 mg of total RNA prepared from 5?0 ACs. For reverse transcription, we used Superscript III (Invitrogen), and PCR was carried out with Ex Taq DNA polymerase (Takara, Japan). Primer sets used for PCR were as follows: ODC: GCCATTGTGAAGACTCTCTCCATTC and TTCGGGTGATTCCTTGCCAC; Xbra: AGCCTGTCTGTCAATGCTCC and ACTGAGACACTGGTGTGATGG; Chd: AACTGCCAGGACTGGATGGT and GGCAGGATTTAGAGTTGCTTC; Gsc: CACACAAAGTCGCAGAGTCTC and GGAGAGCAGAAGTTGGGGCCA; Siamois: TACCGCACTGACTCTGCAAG and CTGAGGCTCCTGTGGAATTC; Xnr1: GCAGTTAATGATTTTACTGGC and CAACAAAGCCAAGGCATAAC; Xnr2: ATCTGATGCCGTTCTAAGCC and GACCTTCTTCAACCTCAGCC; Xnr3: CTTCTGCACTAGATTCTG and CAGCTTCTGGCCAAGACT; Xnr5: TCACAATCCTTTCACTAGGGC and GGAACCTCTGAAAGGAAGGC; Xnr6: TCCAGTATGATCCATCTGTTGC and TTCTCGTTCCTCTTGTGCCTT. Xvent1: AAGTATGCCAAGGAGATGCC and AGCTTCTTCCGTTCAGATGC; Xvent2: TGAGACTTGGGCACTGTCTG and CCTCTGTTGAATGGCTTGCT; Xwnt8: AGATGACGGCATTCCAGA and TCTCCCGATATCTCAGGA; mix: GTGTCACTGACACCAGAA and AATGTCTCAAGGCAGAGG; mixer: CAATGTCACATCAACTGAAG and CACCAGCCCAGCACTTAACC;Cycloheximide (CHX) treatmentThe procedure for CHX treatment was basically carried out as previously described [18]. Normal or Injected embryos were treated with 40 ng/ml of CHX in 16Steinberg’s solution at Stage 7, and was homogenized at Stage 9.Xenopus Nanog gene cloningTo clone the Xenopus homolog of Nanog gene, we carried out degenerated PCR with following primers: U1: CC(T/C)GA(T/C)TC(A/T)GCCACCAG(T/C)CC(A/ C)AA(G/A), U2: TC(A/T)CC(T/C)GA(T/C)TC(A/T)GCCACCAG(T/ C)CC(A/C), L1: CTGGAACCAG(G/T)TCTT(A/C)ACCTG, L2: CAT(T/C)CT(A/T)CG(G/A)TTCTGGAACCA, L3: TTCAT(T/C)CT(A/T)CG(G/A)TTCTGGAACCAG, and L4: G(G/T)TCTT(A/C)ACCTG(T/C)TTGTA(G/ T)GTGAG. The positions of these primers are summarized in Fig. S1.Results mNanog injection stimulated mesoderm-inducing activity in ACAt first, we confirmed the expression of mNanog protein in Xenopus embryo. By Western blot analysis, we could detect aDorsal Mesoderm-Inducing Activity of Nanogprotein of 40 kDa, consistent with the molecular size of the mNanog protein (Fig. 1A). Immunohistochemistry with antimNanog antibody showed intense mNanog reactivity in the nuclei of mNanog-injected embryos (Fig. 1B, C). Next, we examined the effects of mNanog on Xenopus early embryogenesis. 200 pg of mNanog mRNA injected into the animal pole of 4-cell embryos caused a defect in the anterior region at the late neural stage (Fig. 1D, E), although no obvious developmental delay was observed (data not shown). In 3-day-old tadpoles, head defects with small 12926553 eye vesicles could be seen (Fig. 1G, Table S1). This head defect was more intense and lethality was also strikingly increased by injection with 400 pg of mNanog (Table S1), although the lethality did not manifest until the neural stage (data not shown). To examine whether the head defect occurred by apoptosis, we carried out terminal deoxynucleotidyl transferasemediated deoxyuridine-triphosphate nick end-labeling (TUNEL) assays. mNanog injection increased the number of apoptosis-positive cells, suggesting that the head defect w.