Reativecommons.org/licenses/by/4.0/).Article history: Received 23 June 2016 Received in revised form 10 October 2016 Accepted 18 October 2016 Available online 19 October 2016 Keywords: DNA methyltransferase Single nucleotide polymorphism Gastric cancer Meta-analysis Systematic review1. Introduction In 2012, 951,000 new gastric cancer (GC) cases and 723,000 deaths were estimated worldwide, making it the fifth most common tumor (Ferlay et al., 2015; Torre et al., 2015). GC is a complex disease arising from environmental and genetic factors. However in individuals infected with H. pylori, defined as a definite gastric carcinogen (Yang, 2006), only a few eventually develop into GC, which suggested that hostCorresponding authors. E-mail addresses: [email protected] (F. Hou), [email protected] (Q. Shi). 1 These authors contributed equally.genetic factors may play a crucial role in the susceptibility of GC (Saeki et al., 2013). The epigenetics is believed to be important in the development of cancers, which was defined as a stably heritable changes through modifying gene expression without DNA sequence alterations (Esteller, 2008). The most common epigenetic phenomenon is DNA methylation that refers to a methyl group is conferred to the 5 carbon of a cytosine in a CpG dinucleotide. It is catalyzed by a family of DNA methyltransferases (DNMTs) mainly consisting of three activated forms: DNMT1, DNMT3A and DNMT3B. DNMT1 is thought to be a maintenance DNA methyltransferase which principally maintains CpG methylation, involving in embryonic development and somatic cells survival (Brown and Robertson, 2007) and it is encoded by DNMT1 gene which locates onhttp://dx.doi.org/10.1016/j.ebiom.2016.10.028 2352-3964/?2016 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).H. Li et al. / EBioMedicine 13 (2016) 125?2008; Zhao and Bu, 2012), are correlated to tumor occurrence or decrease (Luo et al., 2015; Chang et al., 2014; Mostowska et al., 2013; Kullmann et al., 2013; Sun et al., 2012; Xiang et al., 2010; Kanai et al., 2003) such as head and neck cancer, and colorectal cancer (Zhu et al., 2015; Duan et al., 2015). However, the associations between DNMTs SNPs and GC risk were still conflicting (Jiang et al., 2012a; Yang et al., 2012). Therefore, for the first time, the effects of DNMTs polymorphisms on the susceptibility to GC were systematically and comprehensively estimated. 2. Materials and Methods 2.1. FT011 solubility search We did a literature search of PubMed, MEDLINE, Embase, Sinomed, CNKI, and WanFang databases to identify relevant studies up to June 1, 2016, using the search strategy: (stomach OR gastric) AND (neoplasms OR tumors OR cancers OR carcinomas) AND (DNMT1 OR DNMT3A OR DNMT3B OR DNMTs OR DNA methyltransferases). The languages were limited to English and Chinese. The search strategy for PubMed was listed in Appendix A. 2.2. Selection CriteriaFig. 1. Flow chart of study selection process.chromosome 19p13.2 (Jiang et al., 2012a). DNMT3A and DNMT3B are considered as de novo methyltransferases which are GSK-1605786 site required for the establishment of embryonic methylation patterns, mainly occurring during gametogenesis and early development (Okano et al., 1999) and they are encoded by DNMT3A and DNMT3B genes locating on chromosome 2p23 and 20q11.2 respectively (Yang et al., 2012). There is considerable evidence that a number of abnormal changes in single nucleotide polymorphism.Reativecommons.org/licenses/by/4.0/).Article history: Received 23 June 2016 Received in revised form 10 October 2016 Accepted 18 October 2016 Available online 19 October 2016 Keywords: DNA methyltransferase Single nucleotide polymorphism Gastric cancer Meta-analysis Systematic review1. Introduction In 2012, 951,000 new gastric cancer (GC) cases and 723,000 deaths were estimated worldwide, making it the fifth most common tumor (Ferlay et al., 2015; Torre et al., 2015). GC is a complex disease arising from environmental and genetic factors. However in individuals infected with H. pylori, defined as a definite gastric carcinogen (Yang, 2006), only a few eventually develop into GC, which suggested that hostCorresponding authors. E-mail addresses: [email protected] (F. Hou), [email protected] (Q. Shi). 1 These authors contributed equally.genetic factors may play a crucial role in the susceptibility of GC (Saeki et al., 2013). The epigenetics is believed to be important in the development of cancers, which was defined as a stably heritable changes through modifying gene expression without DNA sequence alterations (Esteller, 2008). The most common epigenetic phenomenon is DNA methylation that refers to a methyl group is conferred to the 5 carbon of a cytosine in a CpG dinucleotide. It is catalyzed by a family of DNA methyltransferases (DNMTs) mainly consisting of three activated forms: DNMT1, DNMT3A and DNMT3B. DNMT1 is thought to be a maintenance DNA methyltransferase which principally maintains CpG methylation, involving in embryonic development and somatic cells survival (Brown and Robertson, 2007) and it is encoded by DNMT1 gene which locates onhttp://dx.doi.org/10.1016/j.ebiom.2016.10.028 2352-3964/?2016 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).H. Li et al. / EBioMedicine 13 (2016) 125?2008; Zhao and Bu, 2012), are correlated to tumor occurrence or decrease (Luo et al., 2015; Chang et al., 2014; Mostowska et al., 2013; Kullmann et al., 2013; Sun et al., 2012; Xiang et al., 2010; Kanai et al., 2003) such as head and neck cancer, and colorectal cancer (Zhu et al., 2015; Duan et al., 2015). However, the associations between DNMTs SNPs and GC risk were still conflicting (Jiang et al., 2012a; Yang et al., 2012). Therefore, for the first time, the effects of DNMTs polymorphisms on the susceptibility to GC were systematically and comprehensively estimated. 2. Materials and Methods 2.1. Search We did a literature search of PubMed, MEDLINE, Embase, Sinomed, CNKI, and WanFang databases to identify relevant studies up to June 1, 2016, using the search strategy: (stomach OR gastric) AND (neoplasms OR tumors OR cancers OR carcinomas) AND (DNMT1 OR DNMT3A OR DNMT3B OR DNMTs OR DNA methyltransferases). The languages were limited to English and Chinese. The search strategy for PubMed was listed in Appendix A. 2.2. Selection CriteriaFig. 1. Flow chart of study selection process.chromosome 19p13.2 (Jiang et al., 2012a). DNMT3A and DNMT3B are considered as de novo methyltransferases which are required for the establishment of embryonic methylation patterns, mainly occurring during gametogenesis and early development (Okano et al., 1999) and they are encoded by DNMT3A and DNMT3B genes locating on chromosome 2p23 and 20q11.2 respectively (Yang et al., 2012). There is considerable evidence that a number of abnormal changes in single nucleotide polymorphism.
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